In the yaffs2 dir that you got from git there should be a file called patch-ker.sh, which copies over the right files and makes sure Kconfig etc is updated. Remove the fs/yaffs2 folder in your kernel tree, then go to your yaff2 git working directory and run ./patch-ker.sh c m </path/to/kernel> and it should copy and patch everything you need. When I run it it gives me an error saying it can't remove yaffs*.mod.c, but it doesn't seem to affect compilation as it gets past the yaffs building for me afterwards
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